BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F04LP1|AL427501
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig354 1390 0.0
>3x_Contig354
Length = 1443
Score = 1390 bits (699), Expect = 0.0
Identities = 723/731 (98%), Gaps = 1/731 (0%)
Strand = Plus / Minus
Query: 27 aagagtcgatgacgacggccagcaagtgggcctcggcactgcaataaaatataatcataa 86
|||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 730 aagattcgatgacgactgccagcaagttggcctcgtcactgcaataaaatataatcataa 671
Query: 87 agkaatagcgaaatgaggrttaccctttatatcacaatatatgtgcccgtcttgcggtaa 146
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agtaatagcgaaatgaggattaccctttatatcacaatatatgtgcccgtcttgcggtaa 611
Query: 147 aaccgatatgtttggctcaaagttaaatacttttgtgagattctattaccgaatagatca 206
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaccgatatctttggctcaaagttaaatacttttgtgagattctattaccgaatagatca 551
Query: 207 tgacctgaattcagtcatcgaaatgaaagcagtgatggtgttcatttacaaattacctct 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgacctgaattcagtcatcgaaatgaaagcagtgatggtgttcatttacaaattacctct 491
Query: 267 gtagctttctttggtacatgcttctgctcttgcttttctaacagttcccatgcccagtaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtagctttctttggtacatgcttctgctcttgcttttctaacagttcccatgcccagtaa 431
Query: 327 aggatgtaataggtgcctacactaaatagtaccatcttgctgactggttttccccagacc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aggatgtaataggtgcctacactaaatagtaccatcttgctgactggttttccccagacc 371
Query: 387 ctgtagattcttgcatgtggagaaactggctttggctgagcttgttgaaataaagctttg 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgtagattcttgcatgtggagaaactggctttggctgagcttgttgaaataaagctttg 311
Query: 447 gtgaagtgcatgtatggtattttaaggcaataaactgcagcggttgcgcttcttccttgt 506
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgaagtgcatgt-tggtattttaaggcaataaactgcagcggttgcgcttcttccttgt 252
Query: 507 cctgcacaattaagtgcccgaagacactgaggttctgaaaagcatttagcttttttcaaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cctgcacaattaagtgcccgaagacactgaggttctgaaaagcatttagcttttttcaaa 192
Query: 567 gtaccttttgttcaaaattccatactaaatttgttctaccagtgaagagatcgtcatatc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtaccttttgttcaaaattccatactaaatttgttctaccagtgaagagatcgtcatatc 132
Query: 627 gtcatatcttgtaagatgaaaacactgggtaacactgaggtttaatcttttattttgtag 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gtcatatcttgtaagatgaaaacactgggtaacactgaggtttaatcttttattttgtag 72
Query: 687 tatacactgatttatttacatgagttgacttctttccttctcctctattcgcttcgaaca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatacactgatttatttacatgagttgacttctttccttctcctctattcgcttcgaaca 12
Query: 747 gcttttacaca 757
|||||||||||
Sbjct: 11 gcttttacaca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6782
Number of Sequences: 1807
Number of extensions: 6782
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)